Mapped reads for uncultivated Rhodobiaceae bacterium UBA9031 genome r... - SRA

SRX3575698: Mapped reads for uncultivated Rhodobiaceae bacterium UBA9031 genome recovered from ERX552362
1 ILLUMINA (Illumina HiSeq 2000) run: 493,839 spots, 90.4M bases, 49.9Mb downloads

Design: Reads from ERX552362 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA9031 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

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Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Rhodobiaceae bacterium UBA9031 genome recovered from ERX552362

SAMN08018992 • SRS2845580 • All experiments • All runs

Organism: Rhodobiaceae bacterium

Library:

Name: UBA9031_library

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 493,839 spots, 90.4M bases, 49.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR6485689	493,839	90.4M	49.9Mb	2018-02-23

ID:: 4961200

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Sequence Read Archive

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